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Download DICOM from Bruker 7T

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Eduardo Garza-Villarreal edited this page Aug 16, 2019 · 4 revisions

After creating the DICOM of your study or sequence in Paravision, you need to download it for backup and use.

  1. Look for the path. Go into the server ssh nmrsu@172.24.140.48 password: ask Juan or Luis or Eduardo

  2. Search your dataset (example). /mnt/pvDatasets3/nmrsu/20190430_133529_B03_Garza_Prueba_Uso_1_1_1

  3. Open new terminal window and download using rsync or scp. rsync -avzhe ssh --progress --ignore-existing nmrsu@172.24.140.48://mnt/pvDatasets3/nmrsu/20190430_114008_B03_Garza_Manganeso_AH53B_1_1 .

When you download the whole folder, you can also use Bruker2Nifti to directly convert from the native Paravision format to nifti.

Done

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