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@nextstrain-bot nextstrain-bot released this 12 Aug 14:04
3.22.0
0f9ed1c

3.22.0

Nextclade Web: configurable Relative-to dropdown ordering

Dataset authors can now control the order and visibility of entries in the Nextclade Web "Relative to" dropdown via a new ref_nodes.order object in the reference tree JSON. This is a display-only setting and does not affect CLI output. See reference tree documentation, #1779.

Fix: version comparison for dataset and minimizer index selection

Schema and algorithm versions were compared as strings, causing incorrect ordering when version components exceeded single digits (e.g. 3.10.0 sorted before 3.9.0). Datasets or minimizer indexes could be rejected, mis-sorted, or silently downgraded. Version comparison now uses numeric parsing. See #1769.

Fix: web update notification version check

The update-available notification in Nextclade Web compared version strings lexicographically, which could suppress or falsely trigger the update banner when version numbers crossed single-digit boundaries. The comparison now uses semver. See #1770.

CI: GitHub Actions Node.js runtime update

GitHub Actions workflows now use the current Node.js runtime, replacing the deprecated Node 20 runtime. See #1775.

Installation and usage

📚 Documentation: docs.nextstrain.org/projects/nextclade

🌍 Nextclade Web: clades.nextstrain.org

🖥️ Nextclade CLI:

  • 📥 Standalone native executables can be downloaded using the links in the "Assets" section just below. Mind the different operating systems and computer architectures.
  • 🐋 Docker images are available on DockerHub
  • 🐍 Conda package is available in bioconda channel.

⌨️ Source code is on GitHub: github.com/nextstrain/nextclade

🚩 Report bugs, suggest features by submitting a GitHub issue

💾 Nextclade datasets are here
Assets 9
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