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add docker.io#3484

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maxulysse merged 1 commit into
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maxulysse-patch-2
Jun 2, 2023
Merged

add docker.io#3484
maxulysse merged 1 commit into
masterfrom
maxulysse-patch-2

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cc @adamrtalbot

PR checklist

Closes #XXX

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Emit the versions.yml file.
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • PROFILE=docker pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware
    • PROFILE=singularity pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware
    • PROFILE=conda pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware

@maxulysse maxulysse mentioned this pull request Jun 2, 2023
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@maxulysse maxulysse added this pull request to the merge queue Jun 2, 2023
Merged via the queue into master with commit 5b80cb5 Jun 2, 2023
@maxulysse maxulysse deleted the maxulysse-patch-2 branch June 2, 2023 15:26
dbaku42 pushed a commit to dbaku42/modules that referenced this pull request Apr 29, 2026
dbaku42 pushed a commit to dbaku42/modules that referenced this pull request Apr 29, 2026
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2 participants