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Automate back sync to dev after release - #239

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Aratz merged 3 commits into
nf-core:devfrom
Aratz:feature/auto_backsync
Aug 4, 2026
Merged

Automate back sync to dev after release#239
Aratz merged 3 commits into
nf-core:devfrom
Aratz:feature/auto_backsync

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@Aratz

@Aratz Aratz commented Aug 4, 2026

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There are a few manual steps that always need to be done after a release, namely version bumping, adding a new section to the changelog, and updating the pipeline snapshots.

This PR adds a workflow to take care of that after each release (or upon manual trigger). It pushes these changes on a new  PR to be reviewed by a pipeline maintainer.

PR checklist

  • This comment contains a description of changes (with reason).
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • CHANGELOG.md is updated.

@Aratz Aratz self-assigned this Aug 4, 2026
@github-actions

github-actions Bot commented Aug 4, 2026

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Warning

Newer version of the nf-core template is available.

Your pipeline is using an old version of the nf-core template: 4.0.3.
Please update your pipeline to the latest version.

For more documentation on how to update your pipeline, please see the Synchronisation documentation.

@github-actions

github-actions Bot commented Aug 4, 2026

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nf-core pipelines lint overall result: Passed ✅

Posted for pipeline commit 3210936

+| ✅ 234 tests passed       |+
#| ❔   9 tests were ignored |#
Details

❔ Tests ignored:

  • files_exist - File is ignored: assets/multiqc_config.yml
  • files_exist - File is ignored: conf/igenomes.config
  • files_exist - File is ignored: conf/igenomes_ignored.config
  • files_exist - File is ignored: tests/default.nf.test
  • files_unchanged - File ignored due to lint config: LICENSE or LICENSE.md or LICENCE or LICENCE.md
  • files_unchanged - File ignored due to lint config: .github/PULL_REQUEST_TEMPLATE.md
  • files_unchanged - File ignored due to lint config: assets/nf-core-pixelator_logo_light.png
  • files_unchanged - File ignored due to lint config: .gitignore or .prettierignore
  • multiqc_config - multiqc_config

✅ Tests passed:

Run details

  • nf-core/tools version 4.0.3
  • Run at 2026-08-04 06:28:01

@Aratz
Aratz marked this pull request as ready for review August 4, 2026 06:32
@Aratz
Aratz requested a review from a team as a code owner August 4, 2026 06:32

@johandahlberg johandahlberg left a comment

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Nice to get automation for these steps. Looks good to me.

@Aratz
Aratz merged commit ee62b07 into nf-core:dev Aug 4, 2026
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2 participants