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Remove unused <zlib.h> inclusions [minor] #1763

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Merged
pd3 merged 1 commit into from
Jul 27, 2022
Merged

Remove unused <zlib.h> inclusions [minor] #1763

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9 changes: 0 additions & 9 deletions prob1.c
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Original file line number Diff line number Diff line change
Expand Up @@ -30,19 +30,12 @@ THE SOFTWARE. */
#include <errno.h>
#include <assert.h>
#include <limits.h>
#include <zlib.h>
#include "prob1.h"

// #include "kstring.h"
// #include "kseq.h"
// KSTREAM_INIT(gzFile, gzread, 16384)

#define MC_MAX_EM_ITER 16
#define MC_EM_EPS 1e-5
#define MC_DEF_INDEL 0.15

gzFile bcf_p1_fp_lk;

void bcf_p1_indel_prior(bcf_p1aux_t *ma, double x)
{
int i;
Expand Down Expand Up @@ -304,8 +297,6 @@ static void mc_cal_y_core(bcf_p1aux_t *ma, int beg)
}
}
if (z[0] != ma->z) memcpy(ma->z, z[0], sizeof(double) * (ma->M + 1));
if (bcf_p1_fp_lk)
gzwrite(bcf_p1_fp_lk, ma->z, sizeof(double) * (ma->M + 1));
}

static void mc_cal_y(bcf_p1aux_t *ma)
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1 change: 0 additions & 1 deletion vcfcall.c
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Expand Up @@ -32,7 +32,6 @@ THE SOFTWARE. */
#include <math.h>
#include <htslib/vcf.h>
#include <time.h>
#include <zlib.h>
#include <stdarg.h>
#include <htslib/kfunc.h>
#include <htslib/synced_bcf_reader.h>
Expand Down