GREIN : GEO RNA-seq Experiments Interactive Navigator
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Updated
May 28, 2019 - HTML
GREIN : GEO RNA-seq Experiments Interactive Navigator
Phigaro is a scalable command-line tool for predicting phages and prophages
An unsupervised transfer learning approach for rare disease transcriptomics
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
Manuscript describing ChronQC is now available online in Bioinformatics
Analysis of insertions in the genomes and proteins of coronaviruses. Illustration: AvH. (2020). Covid-19 cracked <http://doi.org/10.5281/zenodo.3734643>
Teaching material used in the "Advanced Bioinformatics for Next-Generation Sequencing" class, University of Copenhagen, 2021
Supplementary files for follicular lymphoma project 2021
Documentation for various ESR projects.
Whole-Genome-Sequencing analysis pipeline of Ascochyta rabiei isolates
A bare bones tutorial on how to analyse spatial transcriptomics data from raw sequencing reads to visualising spatially distinct features
A Notebook for my Career on DS
Maximum likelihood phylogeny and testing molecular models of evolution for cytochrome c oxidase subunit 1 sequences of Polynoidae from Barcode of Life Database
scRNA Analysis tutorials
workflow and notes on large virus genome assembly and snp call using FastQC, Trimmomatic, bowtie2, and samtools.
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