To map a given pair of motif-domain or domain-domain onto the best PDB complex
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Updated
Jul 14, 2020 - Python
To map a given pair of motif-domain or domain-domain onto the best PDB complex
BLAST wrapper for python that handles circular sequences
This program is able to align reads to a database with genomes of reference and support single or paired-end reads from Illumina sequencing technology in FASTQ format (or fastq.gz)
Local Sequence Alignment Tool for Probabilistic DNA databases
Protocol to perform a reciprocal blast for comparison of two de-novo gene annotations based on different genome assemblies.
The local version of the RecBlast
Teaching complete beginners their first command line BLAST.
Set of tools for protein sequence enrichment and protein domain finding
A Python3 script to quickly spot check 10 random sequences from a BAM/FASTx file.
Retrieve and create a custom BLAST database by taxonomic search
Blast wrapper using snakemake to generate correspondance between a list of transcript or protein and some proteomes.
My first Python script: a simple algorithm to compare sequences with variable input region not relying on any additional packages.
Computational Biology Methods and Research (COMP 561) Course Project
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