Notebooks for working with The Cancer Imaging Archive datasets. Have you written one? Submit a PR!

This collection of information is my personal notebook regarding cancer. The general focus is integrative and complimentary medicine where pharmaceutical meds are paired with nutrition and exercise. This approach focuses on A) setting the metabolic terrain up for successful maintenance and B) repairing damage from chemotherapy.

Collection of analysis scripts and notebooks related to regulated cell death

2D tumor angiogenesis simulation using Python and Jupyter Notebooks. Models explore tumor cell diffusion, proliferation, and vascular irrigation. Includes multiple initial conditions, diffusion coefficients, and dynamic blood vessel growth for tumor simulation.

🌸 Notebooks for making publish-worthy visualizations using WHO breast cancer data

Colab notebook exploring the Cervical Cancer Risk Dataset and models' performance to predict risk of cancer.

Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models

📓Notebook of Climente-González et al. (2017), The Functional Impact of Alternative Splicing in Cancer.

iPython notebook using sklearn to predict breast cancer using logistic regression