Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses
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Updated
Sep 9, 2024 - Python
Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses
Python implementation of the paper "Discrete Differential-Geometry Operators for Triangulated 2-Manifolds" by Meyer et. al. VisMath 2002
This repository contains the python implementation of the paper titled "Discrete Differential-Geometry Operators for Triangulated 2-Manifolds" by Meyer et. al. VisMath 2002 http://multires.caltech.edu/pubs/diffGeoOps.pdf
Matlab and Python code to compute perturbed topological signatures (PTS), an efficient topological representation that lies on the Grassmann manifold.
Riemannian geometry in JAX
Code-repository for the ICML 2020 paper Fairwashing explanations with off-manifold detergent
Pose refinement with differentiable rendering
ArchGeo library code for the paper "Discrete Orthogonal Structures"
A package for protein conformational ensemble analyses based on a differential geometry representation of protein backbones.
A Python package for information-geometric and information-topological analysis of mathematical models
Calculates the eigendecomposition of the Laplace-Beltrami operator on charts of Riemannian manifolds. Moved to https://git.sr.ht/~jmbr/laplace-beltrami-eigensolver
Building geometric objects using blending techniques and global deformations
Graph dynamical systems library
A toolkit to manipulate n-dimensional geometric curves in Python ➰
Drafts of textbooks. One on the math inspired by supersymmetric field theories. One on low dimensional (below 3+1) integrable physics.
Integrators on homogeneous spaces
Simple visualization of oblique cone intersection with unit sphere
Vibration excitation in gearboxes due to surface deviations.
General Relativity Utilities in Python
A package to simulate the output of a control system by means of the Chen-Fliess series.
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