Multiple sequence alignment tool that builds on the concept of seed-and-extend algorithms
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Updated
Mar 7, 2024 - C++
Multiple sequence alignment tool that builds on the concept of seed-and-extend algorithms
Mutation Finder and Genome Comparison Toolset
this CLI finds the repeated STRs in a given DNA sequence
Code for systematically classify data in SRA according to all the taxa present in the reads (SRA-metagenome)
Questions solved on rosalind.info related to Bioinformatics.
Pipeline to prepare alignments for visualization with ACT (goo.gl/1T28jX) and for locating possible inter-chromosomal re-arrengments/misjoints
C++ Codes for the DNA Sequence Motif Discovery Using Greedy Construction Algorithm Based Techniques
Strand Displacement Cascades simulator
A project to sequence the RNA from actual error prone reads from a PCR process and then to analyze the sequenced protein sequence
Multiple Objective Optimization work for optimizing aptamer binding to new targets done in collaboration with Chris Knight and Josh Knowles
Converts DNA to Protein along 1, 6 (fwd or reverse strand) or user defined frames
Approximate pattern matching with Counting Filter on q-grams using SSE instructions (CF2)
Small school project to convert from DNA to mRNA to proteins using C++
VR Cave DNA Visualization Demo
BME3160 Bioinformatics Lecture examples in C++ and Perl
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