(Legacy project) A modular laboratory experiment management suite, predecessor to qudi-core.
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Updated
Mar 27, 2024 - Python
(Legacy project) A modular laboratory experiment management suite, predecessor to qudi-core.
A Python toolbox for quantitative, reproducible flow cytometry analysis
Self-supervised models for encoding protein localization patterns from microscopy images
ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.
Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy
An interactive image processing program for biologists written in Python.
Modeling and Bayesian analysis of fluorescence and absorbance assays.
GLabViz - Interactive Analysis and Visualization Application for Scientific Data written in Python using Qt and pyqtrgaph
Burst analysis software for smFRET. **Moved to OpenSMFS organization**
A Feature-Driven Richardson-Lucy Deconvolution Network
Global analysis platform for fluorescence data
Burst analysis software for single and multi-spot single-molecule FRET (smFRET) data.
iFISH Probe Design: a Python3 package to build iFISH probes.
Python library for the preprocessing, correction, deconvolution and analysis of Excitation Emission Matrices (EEMs).
DLTReconvolution - A Python based software for the analysis of lifetime spectra using the iterative least-square reconvolution method
Analyze fluorescence lifetime and anisotropy decays
Analyze fluorescence lifetime and anisotropy decays. (Mirror of github.com/fdsteffen/Lifefit)
Physically corrected projectors for X-ray induced emission CT.
Zebrafish embryo fluorescence quantification
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