a framework for training sequence-level deep learning networks
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Updated
Jul 15, 2024 - Jupyter Notebook
a framework for training sequence-level deep learning networks
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
A modular annotation tool for genomic variants
RADseq Data Exploration, Manipulation and Visualization using R
PANDORA - Predictive Analytics aNd Data Oriented Research Applications 💻
Phigaro is a scalable command-line tool for predicting phages and prophages
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
Genome Contact Map Explorer - gcMapExplorer. Visit:
stackr: an R package to run stacks software pipeline
Shiny app for making and annotating Volcano plots
Fast and precise comparison of genomes and metagenomes (in the order of terabytes) on a typical personal laptop
Run Sentieon pipelines on Google Cloud Platform
R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
genomic alignment similarity search tool
Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array
Python library to query and transform genomic data from indexed files
Collection of statistical scripts, image analysis workflows, data used in publications by the Misteli Lab.
Tools for exploration and analysis of biochemical data like genomics and proteins
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