Modelling biological networks course at Aalto university

For the BME MSc of Auth, in the subject of Medical Robotics, the assignment of Team A, was the mathematical description of a 4DOF robotic finger. Matlab was used to create a GUI, and an MQTT server in order to communicate with Team B who created the corresponding model in Unity.

Modelling the phenomenon of "Ecological Suicide", for a final year Master's project in Engineering Mathematics.

Modelling and Optimization of Models with a focus on Healthcare and Biological Networks

A project for Complex Adaptive Systems' computational models

Flocking algorithm implementation in c++

This project aims to be a handler for input creation and running of multiple RICEWQ simulations.

Size-based NPZD model for understanding phytoplankton community size structure

A python simulation in jupyter of a simple biological model

Virtual connectomic datasets in Alzheimer's Disease and aging using whole-brain network dynamics modelling by Arbabyazd et al. (2021)

GluPredKit aims to make blood glucose model training and prediction more accessible.

Book is published https://frank0434.github.io/MasterThesis/

A Python Toolbox for COPASI

A virus simulation for pandemics based on the SIR-network concept.

Python package of computational models relevant to invertebrate processing, from the environment to sensor responses and to deeper neural responses in the invertebrate brain.

A python package for simulating motion in continuous environments and spatial cell types (e.g. place cell).