A DSL for data-driven computational pipelines
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Updated
May 24, 2024 - Groovy
A DSL for data-driven computational pipelines
Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.
Params validation plugin for Nextflow pipelines
VSCode extension to lint , correct and format groovy and Jenkinsfile
Nextflow ChIP-seq data analysis pipeline, National Genomics Infrastructure, Science for Life Laboratory in Stockholm
BACTpipe: An assembly and annotation pipeline for bacterial genomics
This pipeline has moved! Please see:
On-demand containers provisioning service
This Nextflow DSL2 pipeline takes aligned HiC reads, creates contact maps and a table of statistics.
nf-core/phyloplace is a bioinformatics best-practice analysis pipeline that performs phylogenetic placement with EPA-NG.
QUAlity control for RNA_Seq, a nextflow pipeline
OpenRiskNet pipeline for TGX case study: toxicology predictions based on transcriptomic profiles
Linguistic enrichment pipeline for historical dutch, as used in the Nederlab project
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