A DSL for data-driven computational pipelines
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Updated
May 24, 2024 - Groovy
A DSL for data-driven computational pipelines
On-demand containers provisioning service
This Nextflow DSL2 pipeline takes aligned HiC reads, creates contact maps and a table of statistics.
nice utility methods for Nextflow pipelines
VSCode extension to lint , correct and format groovy and Jenkinsfile
Params validation plugin for Nextflow pipelines
An unofficial template to build Nextflow Plugins
This is a personal project focused on creating uniformal pipeline for processing RNA-seq data with the end goal to create a .Rdata object which can be imported into R/Shiny app for downstream analysis and hypothesis testing.
nf-core/phyloplace is a bioinformatics best-practice analysis pipeline that performs phylogenetic placement with EPA-NG.
Unoficial template for Nextflow Plugins
Nextflow pipeline to download repeat annotations from Ensembl onto the Tree of Life directory structure
Nextflow pipeline to extract statistics from a genome about its sequence composition
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