Dataset and code for "Explainable Automated Fact-Checking for Public Health Claims" from EMNLP 2020.
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Updated
Apr 27, 2021 - Python
Dataset and code for "Explainable Automated Fact-Checking for Public Health Claims" from EMNLP 2020.
A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification.
Natural language generation for discrete data in EHRs
Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical biologists and wet-lab personnel to do metagenomics/viromics analyses themselves, without bioinformatics expertise.
Epidemiological weeks calculation based on the US CDC (MMWR) and ISO week numbering systems
❤️ Backend powering OpenAEDMap.org — an OpenStreetMap's life-saving AED map
In silico serotype prediction for Listeria monocytogenes
SARS2seq is a pipeline designed to process raw FastQ data from targeted SARS-CoV-2 sequencing and generate biologically correct consensus sequences of the SARS-CoV-2 genome.
Swiss Society for Public Health
Download raw data and turn it into useful dataset
ViroConstrictor is a pipeline designed to process raw FastQ data from viral amplicon-based sequencing and generate biologically correct consensus sequences of the given viral genome
An ensemble of BERTs for classifying injury narratives
Exploring the latest algorithms which include sentiment classification, information extraction, clustering, and topic modeling for analyzing online social networks, considering both their structure and content.
A reproducible and scalable snakemake workflow for the analysis of DNA metabarcoding experiments, with a special focus on food and feed samples.
COVID Immunity anonymized testing results registered to the IPFS for public healthcare use.
Code, analysis and data for the paper Statistically Evaluating Social Media Sentiment Trends towards COVID-19 Non-Pharmaceutical Interventions with Event Studies.
Classifying multimodal health data with LSTMs
Analytic code from our paper on COVID surveillance case definitions
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