📷 Computer-Vision Demos

Network driver for Brother scanner devices. Daemon for press-to-scan functionality.

DAQmx Examples using MATLAB

Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).

utility functions for analyzing (fly) calcium imaging data

Kind of like CUPS but it's for scanning, not printing. Preform a scan on your flatbed scanner from the web browser.

Measure PSF FWHM along different axes

Serial-section automated anatomy extension for ScanImage

MATLAB tools for running imaging experiments with ScanImage

Matlab TIFF Stack Reader for ScanImage 5 scans (including multiROI).

Perform registration of 3D imaging data and localization of spots (synapses/boutons) in semi-automatic mode (with graphical user interface).

code for 2p imaging experiments that syncs I/O and hardware triggers to neural data acquisition (pupil tracking camera, stimulus presentation, etc.)

Customized bash script for brscan-skey

read and analyse 2 photon images from ScanImage

Perform alternating beam scanning with Scanimage (public release version SI55R1).

A HTTP wrapper for scanimage

This is a bare minimum application providing web interface for scanimage utility. The app was written in very short terms and will be maintained and developed further when possible.

Loads tif format image data recorded in ScanImage and interpolates between that and an application specific log file (.txt)

Tools for recording and analyzing for Ca data

Simple web-based scanner interface for Linux (SANE)