RNAseq pipeline centered on Salmon
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Updated
Nov 11, 2024 - Shell
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transcript
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creates text from audio of A/V input file, using docker, sphinx. extracts keywords and NLP entities. leverages OpenNews, Stanford, Oxford, CMU and more
audio
docker
natural-language-processing
video
offline
entities
speech-recognition
transcript
srt
extract-keywords
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Updated
Mar 4, 2017 - Shell
A set of scripts related to bed12 (or bed3, bed4) data processing
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Updated
Jan 31, 2024 - Shell
Docker image and JSON files for CyverseUK for Mikado, a lightweight Python3 pipeline to identify the most useful or “best” set of transcripts from multiple transcript assemblies
docker
bioinformatics
hpc
transcript
transcripts
cyverseuk
mikado
multiple-transcript-assemblies
hpc-applications
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Updated
May 11, 2018 - Shell
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