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06_identify_area
mike edited this page May 4, 2018
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1 revision
May 2, 2018 - Mike McMahon (mike.mcmahon@dfo-mpo.gc.ca)
This function takes a df with coordinate fields in decimal degrees, and overlays it a shapefile (agg.poly.shp). It adds a column to the df indicating which polygon within the shapefile each point falls within. If no polygon is provided, the df will be assessed against NAFO subdivisions.
# initial data
> head(data)
MISSION SETNO LATITUDE LONGITUDE TOTNO
3 ATC1970176 15 44.16667 -59.85000 41
4 ATC1970176 17 44.33333 -60.51667 560
5 ATC1970176 1 44.31667 -62.20000 947
6 ATC1970176 23 43.41667 -60.56667 7
7 ATC1970176 26 43.53333 -59.83333 3463
8 ATC1970176 28 43.65000 -59.30000 102
> #default uses NAFO Subdivisions
> head(identify_area(df=data))
MISSION SETNO LATITUDE LONGITUDE TOTNO NAFO_BEST
3 ATC1970176 15 44.16667 -59.85000 41 <NA>
4 ATC1970176 17 44.33333 -60.51667 560 4WE
5 ATC1970176 1 44.31667 -62.20000 947 4WK
6 ATC1970176 23 43.41667 -60.56667 7 4WG
7 ATC1970176 26 43.53333 -59.83333 3463 4WG
8 ATC1970176 28 43.65000 -59.30000 102 4WG
>
> # but we can use custom shapefiles and fields too
> head(identify_area(df=data, agg.poly.shp = "/mnt/R_PED/Shared/Spatial/Science/Strata/ped_groundfish/MaritimesRegionEcosystemAssessmentStrata(2014-).shp",agg.poly.field = "StrataID"))
MISSION SETNO LATITUDE LONGITUDE TOTNO StrataID
3 ATC1970176 15 44.16667 -59.85000 41 457
4 ATC1970176 17 44.33333 -60.51667 560 457
5 ATC1970176 1 44.31667 -62.20000 947 462
6 ATC1970176 23 43.41667 -60.56667 7 454
7 ATC1970176 26 43.53333 -59.83333 3463 497
8 ATC1970176 28 43.65000 -59.30000 102 453