Bump actions/checkout from 6 to 7 in /.github/workflows - #185
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TiaTuinstra merged 2 commits intoJun 25, 2026
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Bumps [actions/checkout](https://github.com/actions/checkout) from 6 to 7. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v6...v7) --- updated-dependencies: - dependency-name: actions/checkout dependency-version: '7' dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>
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Bumps [actions/checkout](https://github.com/actions/checkout) from 6 to 7. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v6...v7) --- updated-dependencies: - dependency-name: actions/checkout dependency-version: '7' dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: TiaTuinstra <tiatuinstra@gmail.com>
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Bumps [actions/checkout](https://github.com/actions/checkout) from 6 to 7. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v6...v7) --- updated-dependencies: - dependency-name: actions/checkout dependency-version: '7' dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: TiaTuinstra <tiatuinstra@gmail.com>
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* added dose number to overdue disease list * flag to optionally include dose information in config * add validity markers with flag * removing names and emails from files * Testing refinement (#161) * Propose plan for testing refinement * Audit complete * First pass * Rename test modules * Round 2 * Second pass * Plus type checking pass * Remove conftest duplicate * Adding one E2E smoke test with encryption enabled; restored refined test_pipeline_contracts.py - kept 8 tests for integration contracts * Deleted plans folder - strategy captured in TESTING_STANDARDS.md, DOCUMENTATION_STANDARDS.md, and AGENTS.MD; added @pytest.mark.integration to test_error_propagation.py; fix docs for conftest location --------- Co-authored-by: TiaTuinstra <tiatuinstra@gmail.com> * add validity markers with flag * Testing refinement (#161) * Propose plan for testing refinement * Audit complete * First pass * Rename test modules * Round 2 * Second pass * Plus type checking pass * Remove conftest duplicate * Adding one E2E smoke test with encryption enabled; restored refined test_pipeline_contracts.py - kept 8 tests for integration contracts * Deleted plans folder - strategy captured in TESTING_STANDARDS.md, DOCUMENTATION_STANDARDS.md, and AGENTS.MD; added @pytest.mark.integration to test_error_propagation.py; fix docs for conftest location --------- Co-authored-by: TiaTuinstra <tiatuinstra@gmail.com> * add validity markers with flag * mixed validity logic - if multiple of same vaccine received same day, valid if 1+ is valid; if multiple other vaccines received of mixed validity, then Mixed * Testing refinement (#161) * Propose plan for testing refinement * Audit complete * First pass * Rename test modules * Round 2 * Second pass * Plus type checking pass * Remove conftest duplicate * Adding one E2E smoke test with encryption enabled; restored refined test_pipeline_contracts.py - kept 8 tests for integration contracts * Deleted plans folder - strategy captured in TESTING_STANDARDS.md, DOCUMENTATION_STANDARDS.md, and AGENTS.MD; added @pytest.mark.integration to test_error_propagation.py; fix docs for conftest location --------- Co-authored-by: TiaTuinstra <tiatuinstra@gmail.com> * Bump the minor-and-patch group across 1 directory with 4 updates (#184) Bumps the minor-and-patch group with 4 updates in the / directory: [pypdf](https://github.com/py-pdf/pypdf), [pytest](https://github.com/pytest-dev/pytest), [ty](https://github.com/astral-sh/ty) and [git-changelog](https://github.com/pawamoy/git-changelog). Updates `pypdf` from 6.10.2 to 6.13.3 - [Release notes](https://github.com/py-pdf/pypdf/releases) - [Changelog](https://github.com/py-pdf/pypdf/blob/main/CHANGELOG.md) - [Commits](py-pdf/pypdf@6.10.2...6.13.3) Updates `pytest` from 9.0.3 to 9.1.1 - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst) - [Commits](pytest-dev/pytest@9.0.3...9.1.1) Updates `ty` from 0.0.32 to 0.0.51 - [Release notes](https://github.com/astral-sh/ty/releases) - [Changelog](https://github.com/astral-sh/ty/blob/main/CHANGELOG.md) - [Commits](astral-sh/ty@0.0.32...0.0.51) Updates `git-changelog` from 2.9.3 to 2.9.4 - [Release notes](https://github.com/pawamoy/git-changelog/releases) - [Changelog](https://github.com/pawamoy/git-changelog/blob/main/CHANGELOG.md) - [Commits](pawamoy/git-changelog@2.9.3...2.9.4) --- updated-dependencies: - dependency-name: git-changelog dependency-version: 2.9.4 dependency-type: direct:development update-type: version-update:semver-patch dependency-group: minor-and-patch - dependency-name: pypdf dependency-version: 6.13.2 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: minor-and-patch - dependency-name: pytest dependency-version: 9.1.0 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: minor-and-patch - dependency-name: ty dependency-version: 0.0.49 dependency-type: direct:development update-type: version-update:semver-patch dependency-group: minor-and-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump actions/checkout from 6 to 7 in /.github/workflows (#185) Bumps [actions/checkout](https://github.com/actions/checkout) from 6 to 7. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v6...v7) --- updated-dependencies: - dependency-name: actions/checkout dependency-version: '7' dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: TiaTuinstra <tiatuinstra@gmail.com> * Bump codecov/codecov-action from 6 to 7 in /.github/workflows (#183) Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 6 to 7. - [Release notes](https://github.com/codecov/codecov-action/releases) - [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md) - [Commits](codecov/codecov-action@v6...v7) --- updated-dependencies: - dependency-name: codecov/codecov-action dependency-version: '7' dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: TiaTuinstra <tiatuinstra@gmail.com> * Bump the minor-and-patch group across 1 directory with 3 updates (#187) Bumps the minor-and-patch group with 3 updates in the / directory: [pypdf](https://github.com/py-pdf/pypdf), [pillow](https://github.com/python-pillow/Pillow) and [ty](https://github.com/astral-sh/ty). Updates `pypdf` from 6.13.3 to 6.14.2 - [Release notes](https://github.com/py-pdf/pypdf/releases) - [Changelog](https://github.com/py-pdf/pypdf/blob/main/CHANGELOG.md) - [Commits](py-pdf/pypdf@6.13.3...6.14.2) Updates `pillow` from 12.2.0 to 12.3.0 - [Release notes](https://github.com/python-pillow/Pillow/releases) - [Changelog](https://github.com/python-pillow/Pillow/blob/main/CHANGES.rst) - [Commits](python-pillow/Pillow@12.2.0...12.3.0) Updates `ty` from 0.0.51 to 0.0.56 - [Release notes](https://github.com/astral-sh/ty/releases) - [Changelog](https://github.com/astral-sh/ty/blob/main/CHANGELOG.md) - [Commits](astral-sh/ty@0.0.51...0.0.56) --- updated-dependencies: - dependency-name: pypdf dependency-version: 6.14.2 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: minor-and-patch - dependency-name: pillow dependency-version: 12.3.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: minor-and-patch - dependency-name: ty dependency-version: 0.0.56 dependency-type: direct:development update-type: version-update:semver-patch dependency-group: minor-and-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump ty from 0.0.56 to 0.0.61 in the minor-and-patch group (#188) Bumps the minor-and-patch group with 1 update: [ty](https://github.com/astral-sh/ty). Updates `ty` from 0.0.56 to 0.0.61 - [Release notes](https://github.com/astral-sh/ty/releases) - [Changelog](https://github.com/astral-sh/ty/blob/main/CHANGELOG.md) - [Commits](astral-sh/ty@0.0.56...0.0.61) --- updated-dependencies: - dependency-name: ty dependency-version: 0.0.61 dependency-type: direct:development update-type: version-update:semver-patch dependency-group: minor-and-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Update setuptools requirement from >=82.0.1 to >=83.0.0 (#189) Updates the requirements on [setuptools](https://github.com/pypa/setuptools) to permit the latest version. - [Release notes](https://github.com/pypa/setuptools/releases) - [Changelog](https://github.com/pypa/setuptools/blob/main/NEWS.rst) - [Commits](pypa/setuptools@v82.0.1...v83.0.0) --- updated-dependencies: - dependency-name: setuptools dependency-version: 83.0.0 dependency-type: direct:development ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Reduce redundancy in preprocess functions (#190) * Reduce redundancy in preprocess functions - ensure_required_column merged into normalize_datafram * single pass for rename and single iteration over REQUIRED_COLUMNS * Three targeted corrections following code review of the dataset-level validity refactor. enrich_grouped_records - remove redundant normalize_validity_status calls test_named_disease_never_produces_mixed - strengthen assertion TestEnrichGroupedRecords - three new tests for uncovered collapse outcomes * Disable dose inclusion and validity markers Set default to disabled * re-structure dose validity such that mixed validity is split into 2 rows for a given date (valid one row, invalid another) * fix(config): preserve optional PDF encryption default Restore encryption.enabled to false so the next-dose feature does not silently change the default delivery artifact. Encryption remains available through the existing explicit configuration flag. * docs(config): clarify same-date validity grouping Document that a vaccine carries one validity state across its mapped diseases. Keep same-date vaccines together when their markers occupy different columns, and reserve row splitting for conflicting states in the same displayed column, including Other. * fix(config): honor selected parameters in core steps Thread the CLI-selected parameters.yaml path through preprocessing and notice generation so include_dose, show_validity_markers, chart headers, and notice dates use the same configuration as the orchestrator. Preserve repository defaults for direct function callers and cover both step forwarding and configuration consumption with focused tests. * fix(notices): localize overdue dose labels Preserve the stable preprocessed dose string while translating its disease and generated ordinal suffix separately at render time. French notices now receive localized disease names and dose ordinals without changing the artifact schema or ordinary disease-label lookup. * fix(preprocess): recognize lowercase validity suffixes Align dataset classification and dose parsing with the documented validity allowlist by accepting lowercase and title-case Valid/Invalid tokens only. Preserve unsupported casings as unknown vaccine text and cover accepted and rejected variants explicitly. * fix(preprocess): preserve empty dose suffixes Guard dose-number formatting before indexing the normalized suffix so malformed entries such as 'Polio - ' remain visible instead of aborting preprocessing. Retain the existing warning path for non-empty out-of-range dose values. * fix(preprocess): enforce overdue dose display contract Treat preprocess.include_dose as an explicit schema contract. Disabled dose display now strips supplied dose fields while preserving disease-only lists, and enabled display rejects entries that do not use the dose-bearing schema. Blank dose fields remain non-fatal: emit a client-specific preprocessing warning and display only the disease name. Document the behavior and cover hidden, missing, and blank dose cases in unit and integration tests. * fix(notices): keep French output to two pages Condense redundant French vaccine and outbreak wording so the signature remains on the first page and the immunization record stays on page two. Strengthen the English and French baseline E2E tests to inspect validation metadata, require zero PDF warnings, and assert that every generated notice has exactly two pages. --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Justin Angevaare <justinangevaare+github@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Justin Angevaare <justin.angevaare@wdgpublichealth.ca>
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Bumps actions/checkout from 6 to 7.
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Changelog
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Commits
9c091bbupdate error wording (#2467)1044a6dgetting ready for checkout v7 release (#2464)f028218Bump the minor-npm-dependencies group across 1 directory with 3 updates (#2462)d914b26upgrade module to esm and update dependencies (#2463)537c7efBump@actions/coreand@actions/tool-cacheand Remove uuid (#2459)130a169Bump js-yaml from 4.1.0 to 4.2.0 (#2461)7d09575Bump flatted from 3.3.1 to 3.4.2 (#2460)0f9f3aaBump actions/publish-immutable-action (#2458)f9e715ablock checking out fork pr for pull_request_target and workflow_run (#2454)Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting
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