Bump the uv group with 10 updates - #100
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Bumps the uv group with 10 updates: | Package | From | To | | --- | --- | --- | | [bioio-ome-zarr](https://github.com/bioio-devs/bioio-ome-zarr) | `3.5.1` | `3.6.0` | | [matplotlib](https://github.com/matplotlib/matplotlib) | `3.11.0` | `3.11.1` | | [pandas](https://github.com/pandas-dev/pandas) | `3.0.3` | `3.0.5` | | [pyarrow](https://github.com/apache/arrow) | `24.0.0` | `25.0.0` | | [trame-vtk](https://github.com/Kitware/trame-vtk) | `2.11.13` | `2.11.15` | | [trame-vuetify](https://github.com/Kitware/trame-vuetify) | `3.2.2` | `3.2.5` | | [vortex-data](https://github.com/spiraldb/vortex) | `0.75.0` | `0.83.0` | | [poethepoet](https://github.com/nat-n/poethepoet) | `0.47.1` | `0.48.0` | | [pydata-sphinx-theme](https://github.com/pydata/pydata-sphinx-theme) | `0.19.0` | `0.20.0` | | [jupytext](https://github.com/jupytext/jupytext) | `1.19.4` | `1.19.5` | Updates `bioio-ome-zarr` from 3.5.1 to 3.6.0 - [Release notes](https://github.com/bioio-devs/bioio-ome-zarr/releases) - [Commits](bioio-devs/bioio-ome-zarr@v3.5.1...v3.6.0) Updates `matplotlib` from 3.11.0 to 3.11.1 - [Release notes](https://github.com/matplotlib/matplotlib/releases) - [Commits](matplotlib/matplotlib@v3.11.0...v3.11.1) Updates `pandas` from 3.0.3 to 3.0.5 - [Release notes](https://github.com/pandas-dev/pandas/releases) - [Commits](pandas-dev/pandas@v3.0.3...v3.0.5) Updates `pyarrow` from 24.0.0 to 25.0.0 - [Release notes](https://github.com/apache/arrow/releases) - [Commits](apache/arrow@apache-arrow-24.0.0...apache-arrow-25.0.0) Updates `trame-vtk` from 2.11.13 to 2.11.15 - [Release notes](https://github.com/Kitware/trame-vtk/releases) - [Changelog](https://github.com/Kitware/trame-vtk/blob/master/CHANGELOG.md) - [Commits](Kitware/trame-vtk@v2.11.13...v2.11.15) Updates `trame-vuetify` from 3.2.2 to 3.2.5 - [Release notes](https://github.com/Kitware/trame-vuetify/releases) - [Changelog](https://github.com/Kitware/trame-vuetify/blob/master/CHANGELOG.md) - [Commits](Kitware/trame-vuetify@v3.2.2...v3.2.5) Updates `vortex-data` from 0.75.0 to 0.83.0 - [Release notes](https://github.com/spiraldb/vortex/releases) - [Commits](vortex-data/vortex@0.75.0...0.83.0) Updates `poethepoet` from 0.47.1 to 0.48.0 - [Release notes](https://github.com/nat-n/poethepoet/releases) - [Commits](nat-n/poethepoet@v0.47.1...v0.48.0) Updates `pydata-sphinx-theme` from 0.19.0 to 0.20.0 - [Release notes](https://github.com/pydata/pydata-sphinx-theme/releases) - [Changelog](https://github.com/pydata/pydata-sphinx-theme/blob/main/RELEASE.md) - [Commits](pydata/pydata-sphinx-theme@v0.19.0...v0.20.0) Updates `jupytext` from 1.19.4 to 1.19.5 - [Release notes](https://github.com/jupytext/jupytext/releases) - [Changelog](https://github.com/jupytext/jupytext/blob/main/CHANGELOG.md) - [Commits](jupytext/jupytext@v1.19.4...v1.19.5) --- updated-dependencies: - dependency-name: bioio-ome-zarr dependency-version: 3.6.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: uv - dependency-name: matplotlib dependency-version: 3.11.1 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: pandas dependency-version: 3.0.5 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: pyarrow dependency-version: 25.0.0 dependency-type: direct:production update-type: version-update:semver-major dependency-group: uv - dependency-name: trame-vtk dependency-version: 2.11.15 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: trame-vuetify dependency-version: 3.2.5 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: vortex-data dependency-version: 0.83.0 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: uv - dependency-name: poethepoet dependency-version: 0.48.0 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: uv - dependency-name: pydata-sphinx-theme dependency-version: 0.20.0 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: uv - dependency-name: jupytext dependency-version: 1.19.5 dependency-type: direct:development update-type: version-update:semver-patch dependency-group: uv ... Signed-off-by: dependabot[bot] <support@github.com>
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approved these changes
Aug 1, 2026
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Bumps the uv group with 10 updates:
3.5.13.6.03.11.03.11.13.0.33.0.524.0.025.0.02.11.132.11.153.2.23.2.50.75.00.83.00.47.10.48.00.19.00.20.01.19.41.19.5Updates
bioio-ome-zarrfrom 3.5.1 to 3.6.0Release notes
Sourced from bioio-ome-zarr's releases.
Commits
d5cf0c4Merge pull request #153 from bioio-devs/feature/writer-attributesaed5048Merge branch 'main' into feature/writer-attributes2c29693Merge pull request #157 from bioio-devs/bugfix/allow-remote-dest2cbcdd6update dev docs66f1b2dremove aics-specific info3095f82remove outdated commentc09cbd3infer bucket from envce6a7e9lint3f729f3lintb3d2f89start on s3 integration testUpdates
matplotlibfrom 3.11.0 to 3.11.1Release notes
Sourced from matplotlib's releases.
Commits
3c1757aREL: v3.11.1792c6b5DOC: Prepare for 3.11.1aaff9f6Merge branch 'v3.11.0-doc' into v3.11.xd4f4527Merge pull request #32052 from meeseeksmachine/auto-backport-of-pr-32038-on-v...6ad4bcfMerge pull request #32050 from meeseeksmachine/auto-backport-of-pr-31304-on-v...7fb74d3Merge pull request #32051 from meeseeksmachine/auto-backport-of-pr-32037-on-v...c624aecBackport PR #32038: Fix occasional misalignment in reported mouse position (a...8eda2b7Backport PR #32037: Bump the actions group with 3 updatesa0e7ae5Backport PR #31304: Fix restoring 'auto' aspect in 3D axes after switching fr...9001323Merge pull request #32047 from meeseeksmachine/auto-backport-of-pr-32025-on-v...Updates
pandasfrom 3.0.3 to 3.0.5Release notes
Sourced from pandas's releases.
Commits
e68db09RLS: 3.0.50697623Backport PR #66428: DOC: update whatsnew for 3.0.5 (#66430)5d846d0Backport PR #66090 on branch 3.0.x (BLD: exclude numpy 2.5.0 when building wh...bef7a2bBackport PR #66169 on branch 3.0.x (CI: Fix pyarrow-nightly job (stale nightl...8188eb1RLS: 3.0.4 (#66079)bd35f15[3.0.x] BUG: fix CoW issue in eval() (#66072)6195872[backport 3.0.x] BUG: anchor whole alternation in Series.str.match for PyArro...70313beBackport PR #66051 on branch 3.0.x (BUG: fix regression in DataFrame setitem ...57ed3e2[backport 3.0.x] Bump pypa/cibuildwheel from 3.4.1 to 4.1.0 (#65934) (#66026)f9693fc[backport 3.0.x] BUG(pandas 3.0 regression): drop(index=...) doesn't accept N...Updates
pyarrowfrom 24.0.0 to 25.0.0Release notes
Sourced from pyarrow's releases.
Commits
59bea6eMINOR: [Release] Update versions for 25.0.0381fab6MINOR: [Release] Update .deb/.rpm changelogs for 25.0.07f72d5bMINOR: [Release] Update CHANGELOG.md for 25.0.0fe2f85cGH-50336: [Release][Archery] Fix archery GitHub integration for release scrip...c658548GH-50293: [CI] Run check-labels for all triggers to avoid cancelling further ...f83c8caGH-50330: [C++][R][Parquet] Add missing typename in RleBitPackedDecoderGetRun...35e0f63GH-50318: [R][CI] Install missing libpng-dev for test-r-linux-as-cran (#50328)61ca7a9GH-50295: [C++][R] #include <ranges> in vector_select_k.cc breaks macOS CRAN ...1b6edb8GH-50291: [Python][Packaging] Stop using nightly build dependencies for build...e183ea9MINOR: [Docs] Add Timestamp With Offset to canonical extension types status (...Updates
trame-vtkfrom 2.11.13 to 2.11.15Release notes
Sourced from trame-vtk's releases.
Commits
e74a0512.11.154705177fix(int64): always convert to 32b for vtk.js3af24edfix(array): use numpy dtype for js array mappingb2df082fix(static_viewer): update viewer to latest version590c5c3fix(export): prevent gc on new array for conversion6e4f5c0docs: make wasm work with 64 bitsc794868fix(StaticViewer): update static viewer to fix loading of embedded dataset094ee32docs(example): add link to issuead633352.11.1406d5cfffix(vtkLongArray): convert to 32 bits for JSUpdates
trame-vuetifyfrom 3.2.2 to 3.2.5Release notes
Sourced from trame-vuetify's releases.
... (truncated)
Changelog
Sourced from trame-vuetify's changelog.
... (truncated)
Commits
731f9133.2.5c1dfec6ci: add trame as dependency for testsdcf56f6test: improve widget testaf770ebfix(v2): update doc url78f33a33.2.490dcae8fix: maintain deprecated import1371ab93.2.38c14e57fix(generate-python): Update doc url for v2 to point to v2 docs5782378fix(generate-python): Be more specific on url portion to replacec74fcc6ci: Fix paths to navigate during buildUpdates
vortex-datafrom 0.75.0 to 0.83.0Release notes
Sourced from vortex-data's releases.
... (truncated)
Commits
14a55e9fix(cuda): synchronize Arrow exports with buffer streams (#8952)468c5f1Introduce array_slots macro for type-safe array slot access (#8912)1e6102bbreak: new layout tree vtable (#8910)299592dfeat[cuda]: add direct I/O for local file scans (#8898)63d1b8avortex-jni includes vortex-geo, jni arrow import/export uses session methods ...9c10b73Expose LayoutStrategy::buffered_bytes through the jni boundary (#8909)1bda2e9feat[compressor]: require schemes to declare their produced encodings (#8944)03ca2edduckdb: pushdown expressions with LIMIT (#8943)11a6c04perf(cuda): decode FSST strings with GPU-built Arrow offsets (#8921)1b28996perf(array): hoist decimal same-scale cast plan (#8932)Updates
poethepoetfrom 0.47.1 to 0.48.0Release notes
Sourced from poethepoet's releases.
Commits
e4d032cBump version to 0.48.0e7a31befeat: Adduses_envtask option for loading variables from a task's output (...Updates
pydata-sphinx-themefrom 0.19.0 to 0.20.0Release notes
Sourced from pydata-sphinx-theme's releases.
Commits
3cffc43Bump 0.19.0 -> 0.20.0 (#2437)53488b7Fix relative json_url on home page when using dirhtml builder (#2436)db2d3ab[pre-commit.ci] pre-commit autoupdate hooks (#2435)266c201Fix broken link in our example gallery and replace it with another one (#2430)fd586dcBump py-cov-action/python-coverage-comment-action from 3.41 to 4.1 (#2432)6ac6322Bump actions/cache from 5.0.5 to 6.1.0 (#2433)6f2c50cBump actions/setup-python from 6.2.0 to 6.3.0 (#2431)7d2dc8cUnpin internal actions (#2427)6dde1c3fix: stabilize Read the Docs Ubuntu image (#2429)d001992Bump internal actions (#2426)Updates
jupytextfrom 1.19.4 to 1.19.5Release notes
Sourced from jupytext's releases.
Changelog
Sourced from jupytext's changelog.
Commits
3132c6cVersion 1.19.5d8d4d14build(deps): bump axios from 1.16.0 to 1.18.1 in /jupyterlab in the jupytext-...1a6fde9build(deps): bump the actions-dependencies group with 3 updates0068463build(deps): bump astro58c1eb9build(deps): bump the jupytext-extension-dependencies group across 2 director...af6134eMigrate to jupyter-builder for building frontend extension (#1590)bb0de16build(deps): bump the actions-dependencies group across 1 directory with 8 up...555b4c2avoid quadratic backtracking in help/bash magic regexf24a3b7reuse secure temp files in marimo_py_to_notebookd53e2f1Require zizmor and precommit on ci (#1594)Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting
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