#

alignment

Here are 19 public repositories matching this topic...

mwip / beautifyR

RStudio addin for formatting Rmarkdown tables

markdown r rmarkdown alignment comments markdown-table rstudio-addin

Updated Oct 20, 2022
R

figpatch

BradyAJohnston / figpatch

Easily Arrange Images with Patchwork Alongside ggplot2 Figures.

ggplot2 rmarkdown alignment patchwork

Updated Jan 22, 2025
R

sigven / cacao

Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer

quality-control cancer coverage-report sequencing next-generation-sequencing cancer-genomics alignment quality-assurance command-line-tool bam clinical-decision-support pathogenic-variants sequencing-coverage pathogenic-loci

Updated Dec 8, 2020
R

Kuanhao-Chao / RNASeqR

📊 An R package of RNA-seq workflow

workflow quality-control r pipeline alignment bioconductor enrichment-analysis differential-gene-expression rnq-seq

Updated May 4, 2022
R

brandonsie / epitopefindr

R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.

alignment antibody epitope-discovery peptides blastp

Updated May 3, 2024
R

ben-laufer / RNA-seq

RNA-seq alignment and analysis pipeline

bioinformatics rna-seq r pipeline slurm gene-expression alignment star differential-gene-expression limma-voom

Updated Jul 16, 2021
R

bixBeta / CFG

RNA-seq workflow for UALBANY CFG - Demux, QC, Vis, Align, preProcess, DGE Calls

alignment multiqc star illumina homer demultiplexing fastqc bcl2fastq

Updated Apr 30, 2019
R

endlessloop2 / UC-AI-Thinkathon-2023

Winning entry for the UC Chile AI Safety Thinkathon 2023. Coauthor @mon-b

ai alignment ai-safety aisafety gpt-3

Updated Mar 1, 2023
R

Schmytzi / simplePlotTable

A simple table to include in ggplot

ggplot2 table data-visualization alignment

Updated Mar 16, 2021
R

stolarczyk / BALCONY

R package: BALCONY (Better ALignment CONsensus analYsis)

conservation protein alignment evolutionary-biology protein-tunnels

Updated Jun 1, 2022
R

oleon12 / alignTools

Easy download and manage GenBank data, and alignments for phylogenetics

download phylogenetics genbank alignment concatenate

Updated Mar 15, 2021
R

ubccr / treat

Trypanosome RNA Editing Alignment Tool

bioinformatics alignment trypanosome rna-editing kinetoplastid

Updated Jan 16, 2024
R

simeonqs / callsync

R package to align recordings, detect, assign, trace and analyse vocalisations

r detection software alignment spectrogram audio-processing fundamental-frequency bioacoustics

Updated Jun 5, 2024
R

SeverinBang / blotIt3

Method for aligning biological replicate data

systems-biology alignment scale-data time-course gels

Updated Mar 31, 2022
R

Harshith-Reddy-CK / pupil_bio_data_analysis

Welcome to the Pupil Bio Data Analysis repository! This repository contains code and scripts used for the bioinformatics challenge related to identifying somatic mutations and performing quality control for cancer sample analysis.

quality-control alignment methylation-analysis mutation-calling phased-methylation-patterns

Updated Jan 20, 2025
R

sanjaysingh765 / Pairwise_Sequence_Alignment_With_R

How to Perform Pairwise Sequence Alignment With R

alignment sequence

Updated Mar 19, 2017
R

dvera / harp

Haplotype-Assisted Read Parsing

genomics alignment fastq allele-specific

Updated Feb 18, 2020
R

ggirelli / gpseq-seq-gg

GPSeq sequencing data analysis pipeline

pipeline genome filter sequencing alignment umi reads gpseq genome-architecture

Updated Jul 16, 2019
R

simeross / ggseqalign

R package to plot pairwise alignments of strings, specifically DNA/AA sequences.

visualization bioinformatics r alignment minimalistic ggplot2-enhancements

Updated Dec 26, 2024
R

Improve this page

Add a description, image, and links to the alignment topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the alignment topic, visit your repo's landing page and select "manage topics."