Here are
78 public repositories
matching this topic...
To map a given pair of motif-domain or domain-domain onto the best PDB complex
Updated
Jul 14, 2020
Python
Un script de python que usa BLAST, MUSCLE y PROSITE para analizar una serie de proteínas
Updated
Jun 24, 2020
Python
Map SNP positions to a supplied reference assembly using BLAST. Filter results for best hit. Output in plink format.
Updated
Jul 2, 2022
Python
Simple implementation of the BLAST algorithm
Updated
Apr 9, 2024
Python
Local Sequence Alignment Tool for Probabilistic DNA databases
Updated
Sep 25, 2020
Python
The local version of the RecBlast
Updated
Mar 4, 2017
Python
Functional genomics tools
Updated
Jul 30, 2018
Python
Web application for improved BLAST local sequence alignment
Updated
May 16, 2019
Python
Teaching complete beginners their first command line BLAST.
Updated
Nov 17, 2020
Python
Retrieve and create a custom BLAST database by taxonomic search
Updated
Feb 23, 2018
Python
Takes GenBank data (csv and fasta), aggregates set using common length, and identifies SNPs. Buffered nucleotide location with most frequent mutations will be BLASTed (Basic Local Alignment Search Tool) to return top organism match.
Updated
Jul 29, 2020
Python
An automatic turret made with Pygame
Updated
Jan 29, 2024
Python
Blast wrapper using snakemake to generate correspondance between a list of transcript or protein and some proteomes.
Updated
Sep 6, 2022
Python
My first Python script: a simple algorithm to compare sequences with variable input region not relying on any additional packages.
Updated
Nov 3, 2021
Python
dna/rna alignment classifier
Updated
Dec 12, 2023
Python
Implementing SQLite Database
Updated
Sep 19, 2021
Python
This repository contains scripts that facilitate the manipulation of large amounts of data for phylogenomic analysis.
Updated
Mar 18, 2022
Python
A command line tool for identifying conserved lysine modification sites
Updated
Dec 8, 2022
Python
E. coli proteins fragments matching using BLAST database and ontology analysis.
Updated
Jun 4, 2021
Python
Sequentially Blast fasta files against a local database
Updated
Dec 17, 2017
Python
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