Programming Life, contextproject 2015.
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Updated
Jun 21, 2015 - Java
Programming Life, contextproject 2015.
Masters Course Project, Completed June 17th 2016 written in Java this project was to create a DNA reading application that would transform DNA into its different reading frames along with transpose it to RNA and such, has a visual component in Swing
A Reliable and Fast Algorithm for Single Individual Haplotyping
DNA alignment with Dynamic Programming
The application to be built allows the manipulation and visualization of DNA chains. Initial chains must be loaded from text files, the chains built modifying the initial chains could be saved in text files using the same format.
FLiCK - Format LeveragIng Compression frameworK
Biostrings port in Java (for study)
Automated detection of nuclei and DNA damage in Caenorhabditis elegans germline
A Universal Toolkit for Handling Sequence Data from Different Sequencing Platforms
A tool for modelling graphs of genetic variation.
BioMight - Human Biological Animation Engine
DNA Sequence Alignment with Dynamic Programming Implementation using the Needleman-Wunsch Algorithm and Smith-Waterman Algorithm.
Extracts all of the possible genes from a string of DNA
LRmix Studio is a free of charge, open-source (GPLv 3 license), expert system dedicated to the interpretation of forensic DNA profiles, with a particular focus on complex DNA mixtures. LRmix Studio enables measuring the probative value of any (autosomal STR-based) forensic DNA profile. LRmix Studio is programmed after the likelihood ratio model …
HCAT CLI is a command line interface tool to analyze DNA sequence data.
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