Fourth version of irma artificial life simulator on rust

📈 Markdown files and R code for BIOS331 (General Ecology) modeling assignments.

This is a quick script using BlackMarble R package. It is user friendly for our lab purposes.

Spatially explicit simulation of species distribution (theoretical ecology). WIP.

Gizzard Shad IPM during an REU at University of Wisconsin - La Crosse

Physical processes in ecosystems: Educational modules introducing biophysical ecology and use of the TrEnChR package.

Simulating tumour development in two and three dimensions using the framework of the spatial Tangled Nature model

Program for running simulations on Odum graphs

This repository provides the code and data to model fire and drought effects in the Mediterranean forests, as in the paper Baudena et al 2020, New Phytologist

School of ecology package for teaching ecological tasks, algorithms and model fitting.

This repository contains code and data to reproduce the analyses described in Rizzuto et al. (2024) Journal of Geophysical Research: Biogeosciences.

Rcpp interface to the individual based model used in Tyre et al 2001

Welcome to the repository for the mathematical models and code associated with the research paper 'Rapid Spread Agents May Impair Biological Control In A Tritrophic Food Web With Intraguild Predation' published in Ecological Complexity in 2021. This repository provides the source code used in the study.

I am using physicochemical properties of mosquitoe larval habitat to predict their abundance and co-occurence, in southern Nigeria.

Code for manuscript "Time-varying effects of local weather on behavior and probability of breeding deferral in two Arctic-nesting goose populations" (Oecologia; 10.1007/s00442-022-05300-x)

Code to replicate the numerical analyses of the model used in Rizzuto et al. (2024) Ecological Modelling.

Agent-based metabolic modelling of microbial communities in time and continuous µ-meter-scale space

Simulate and visualize biological invasions in dynamic landscapes