fasta
Here are 151 public repositories matching this topic...
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
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Jul 7, 2023 - Python
Software for prediction of plasmid sequences in metagenomic assemblies
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Jun 28, 2021 - Python
pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)
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Mar 3, 2017 - Python
Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory. Auto-detects input file formats. Can submit the results to multiple repositories from the command line.
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May 1, 2022 - Python
Simulate metagenomic short reads from one or more populations.
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Jun 7, 2020 - Python
Scoring multiple sequence alignments with Python
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Jun 18, 2023 - Python
Python code to extract features from Protein sequences for Machine Learning/Deep Learning
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Mar 26, 2022 - Python
A Python FASTA file Parser and Writer.
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Sep 3, 2022 - Python
🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies
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Jan 23, 2023 - Python
Explore and analyze biological sequence data
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Aug 1, 2024 - Python
This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).
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May 9, 2019 - Python
CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.
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Oct 18, 2021 - Python
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