ncbi
Here are 196 public repositories matching this topic...
ClinVar Submission API Made Easy
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Jul 8, 2024 - Python
Scripts to download genomes from the NCBI FTP servers
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Jul 3, 2024 - Python
Gene download from NCBI database, sequence alignment and clusterization, realization of different bioinformatics algorithms within ITMO 4 sem course
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Jul 2, 2024 - Jupyter Notebook
A Guide to Automatically Downloading NCBI SRA Reads
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Jul 2, 2024 - Shell
Program and package that retrieves nucleotide coding sequences from NCBI that correspond to a set of input protein sequences.
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Jun 27, 2024 - Python
simplified searching, fetching, and parsing records from NCBI using their E-utilities interface
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Jun 26, 2024 - Python
This repository contains Jonathan et al.'s AoL (Assurance of Learning) Project for SCIE6062001 - Computational Biology Course.
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Jun 26, 2024
NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.
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Jun 25, 2024 - Jupyter Notebook
Python library to deal with taxonomic IDs and lineages from the NCBI's Taxdump files
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Jun 25, 2024 - Python
Turbocharge a PubMed literature rather than clicking and clicking and clicking on Google Scholar
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Jun 20, 2024 - Python
Python script to quickly extract promoter and terminator regions with the NCBI API. Search for the presence of individual pattern or transcription factor responsive elements with manual sequence (IUPAC) or JASPAR API.
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Jun 19, 2024 - Python
`nwr` is a command line tool for working with NCBI taxonomy, Newick files and assembly reports
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Jun 8, 2024 - Rust
Python Clinical Variant Tools This repository hosts Python scripts designed to streamline the retrieval of clinical variant information from authoritative sources such as ClinVar and DisGeNET. These tools facilitate efficient data extraction and analysis for researchers and professionals in the field of genetics and genomics.
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Jun 3, 2024 - Python
Bot that toots when NCBI updates their taxonomy database
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May 28, 2024 - Python
multiprocessed ncbi edirect
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May 23, 2024 - Python
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