bamcc — split SAM/BAM files into connected components

Forked from INRIA forge for conda recipes on atgc channel

my solution on Rosalind

Bioinformatic tool to measure the Unused Index of each Splice Site from RNA-seq

Parallel Windowed Adaptive Trimming for fastq files using quality

In silico research group's bioinformatics toolbox for network and machine learning analysis

Data processing pipeline for extracellular small RNA-seq from human specimen

Super ultra-fast fastq preprocessor, using parallel windowed adaptive trimming.

(NOTE: This is a development fork, please refer to official repo at statgen: https://github.com/statgen/popscle) Freemuxlet methods and auxilary tools

R package for RNA-Seq quantification

CLARK: Fast, accurate and versatile sequence classification system

K-mer indexing and querying in RNA-Seq data

Regulatory networks with Direct Information

A tool to process bam/sam files

GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation

An assembler for circular RNAs

Mapping-free software for fishing relevant reads in an RNA-Seq sample

Assembler for multiple RNA-seq samples

rnabridge-align is an efficient tool to bridge paired-end RNA-seq reads