- Added very basic JSON CAS support
- No support for type systems yet
- No support for lenient loading
- Remove Cas:NULL via type name instead of puring simply the FS with ID 0 (which may not be a Cas:NULL fs)
- Added various constants for type names and feature names in the Cas class (analouge to the Apache UIMA Java SDK impl)
- WIP

- Fixed bad PyDoc comment

* master:
  No issue: make black

- Fixed linter error because type hint was referring to a dynamically created type

- Roll back change of Sofa.sofaArray range type from uima.cas.ByteArray back to uima.cas.TOP which is indeed the range type also used in the Apache UIMA Java SDK - despite only uima.cas.ByteArray being acceptable...

- Added generator for random CASes
- Added JSON tests using random CAS generator
- Added support for (de)serializing type system information in the JSON format
- Move the type/feature name constants from Cas to typesystem.py

- Added another generator for random CASes
- Added more tests
- Commented out all testing of arrays in the new generator since array handling in cassis seems to have a few conceptual problems when need to be looked at first

- Revert change to stripping the null FS
- Changed reference data so that IDs start at 1 and not at 0 leaving 0 reserved for the null FS

* master:
  #167 - Cant serialize byte arrays (#176)

* main:
  #172 - Naming: cas.add_annotation(s) (#181)
  #175 - Set a feature if the feature name is in a variable (#180)
  #175 - Set a feature if the feature name is in a variable
  #174 - FSes that are only transitively referenced cannot be serialized (#179)
  #170 - Handling of the "uima.noNamespace" prefix (#178)
  No issue
  #173 - Rename add_feature to create_feature (#177)

# Conflicts:
#	cassis/typesystem.py

…annot-be-serialized' into feature/168-Experimental-JSON-CAS-support

* bugfix/174-FSes-that-are-only-transitively-referenced-cannot-be-serialized:
  #174 - FSes that are only transitively referenced cannot be serialized (#179)

…annot-be-serialized' into feature/168-Experimental-JSON-CAS-support

* bugfix/174-FSes-that-are-only-transitively-referenced-cannot-be-serialized:
  #174 - FSes that are only transitively referenced cannot be serialized (#179)

* main:
  #174 - FSes that are only transitively referenced cannot be serialized (#179)
  #174 - FSes that are only transitively referenced cannot be serialized (#179)

…ed-and-arrays' into feature/168-Experimental-JSON-CAS-support

* feature/185-186-187-Handling-of-multipleReferencesAllowed-and-arrays:
  #187 - The multipleReferencesAllowed flag on array features is not handled
  #187 - The multipleReferencesAllowed flag on array features is not handled
  #187 - The multipleReferencesAllowed flag on array features is not handled
  #187 - The multipleReferencesAllowed flag on array features is not handled
  #187 - The multipleReferencesAllowed flag on array features is not handled
  #187 - The multipleReferencesAllowed flag on array features is not handled
  #186 - Creating subtypes of inheritance-final types (arrays) is not prevented
  #185 - Transitively referenced primitive arrays not returned by _find_all_fs #186 - Creating subtypes of inheritance-final types (arrays) is not prevented #187 - The multipleReferencesAllowed flag on array features is not handled

- Fix array support
- Enable array tests

…ed-and-arrays' into feature/168-Experimental-JSON-CAS-support

* feature/185-186-187-Handling-of-multipleReferencesAllowed-and-arrays:
  #187 - The multipleReferencesAllowed flag on array features is not handled

* main:
  #183 - Better error message when failing to resolve feature path
  #183 - Better error message when failing to resolve feature path

- Change view members field name

* main:
  #194 - Allow visual comparison between two CASes
  #194 - Allow visual comparison between two CASes
  #194 - Allow visual comparison between two CASes
  #187 - The multipleReferencesAllowed flag on array features is not handled

# Conflicts:
#	cassis/__init__.py

- Formatting
- Removed unused import

…rimental-JSON-CAS-support

* feature/190-real-type-in-type-fs:
  #190 - Allow getting the type system from a type
  #190 - Allow getting the type system from a type
  #190 - Allow getting the type system from a type
  #190 - Allow getting the type system from a type

…rimental-JSON-CAS-support

* feature/190-real-type-in-type-fs:
  #190 - Allow getting the type system from a type

…rimental-JSON-CAS-support

* feature/190-real-type-in-type-fs:
  #190 - Allow getting the type system from a type

- Adjust to changes from #190

…rimental-JSON-CAS-support

* feature/190-real-type-in-type-fs:
  #190 - Allow getting the type system from a type

# Conflicts:
#	cassis/cas.py

…rimental-JSON-CAS-support

* feature/190-real-type-in-type-fs:
  #190 - Allow getting the type system from a type
  #190 - Allow getting the type system from a type

- Adjust to changes from #190

* main:
  #198 - Cas.get_types() does not return all types
  #197 - Update dependencies (#199)
  #198 - Cas.get_types() does not return all types
  #190 - Allow getting the type system from a type
  #193 - Gracefully handle empty CAS xmi files (#196)

- Tune performance when serializing JSON to string instead of writing to disk
- Added rudimentary performance "test"

…eature/168-Experimental-JSON-CAS-support

* feature/202-Improve-profile-for-unique_everseen:
  #202 - Improve profile for unique_everseen
  #202 - Improve profile for unique_everseen

* main:
  #202 - Improve profile for unique_everseen
  #202 - Improve profile for unique_everseen

…168-Experimental-JSON-CAS-support

* commit '708b78aa5008ec09497999e5655662e5b572d972':
  #204 - Provide domain on feature

* main:
  No issue: Dont compute coverage for __version__.py
  No issue: Dont compute coverage for tests
  #206 - Type unmarshalling from string to the actual type specified in the type system
  #206 - Type unmarshalling from string to the actual type specified in the type system
  #206 - Type unmarshalling from string to the actual type specified in the type system
  #206 - Type unmarshalling from string to the actual type specified in the type system
  #204 - Provide domain on feature

- Do not execute performance "tests" when running make test
- Update JSON reference data with new data from UIMA Java SDK - including CAS examples using emojis and other Unicode characters
- Enabled character offset conversion on import/export in JSON (de)serializer

- Update JSON reference data with new data from UIMA Java SDK - including CAS examples using emojis and other Unicode characters
- Enabled character offset conversion on import/export in JSON (de)serializer

…llowed=true fails

- Fixed problem by checking the multipleReferencesAllowed feature during deserialization
- Added test

- Better check whether adding a TextIOWrapper is necessary during serialization
- Fixed bad access to element type name
- Formatting

- Better test if using a TextIOWrapper is really necessary

* main:
  #209 - Parsing an array that was serialized using multipleReferencesAllowed=true fails

- Work around issues with cas_to_compareble_text and FSArrays

* main:
  No issue. Formatting.
  #215 - Ability to exclude types from cas_to_comparable_text
  #212 - Allow loading/saving XMI/typesystems from/to Path
  #211 - Serializing an FSArray without any elements breaks
  #212 - Allow loading/saving XMI/typesystems from/to Path

# Conflicts:
#	cassis/util.py

…ithub.com/dkpro/dkpro-cassis into feature/168-Experimental-JSON-CAS-support

* 'feature/168-Experimental-JSON-CAS-support' of https://github.com/dkpro/dkpro-cassis:
  No issue. Formatting.
  #215 - Ability to exclude types from cas_to_comparable_text
  #212 - Allow loading/saving XMI/typesystems from/to Path
  #211 - Serializing an FSArray without any elements breaks
  #212 - Allow loading/saving XMI/typesystems from/to Path
  #168 - Experimental JSON CAS support
  #168 - Experimental JSON CAS support
  #168 - Experimental JSON CAS support
  #209 - Parsing an array that was serialized using multipleReferencesAllowed=true fails
  - Do not execute performance "tests" when running make test - Update JSON reference data with new data from UIMA Java SDK - including CAS examples using emojis and other Unicode characters - Enabled character offset conversion on import/export in JSON (de)serializer
  #209 - Parsing an array that was serialized using multipleReferencesAllowed=true fails

* main:
  #221 - Unable to parse empty arrays
  #219 - Floating point special values not serialized as expected

- Support for floating point special values in JSON
- Support for not serializing the full type system in JSON but only the minimal or none at all

* main:
  No issue. Fix issues with arrays in cas_to_comparable_text.
  #219 - Floating point special values not serialized as expected

…-CAS-support

* feature/192-cleanup:
  #192 - Cleanup stuff
  #192 - Cleanup stuff
  #192 - Cleanup stuff
  #192 - Cleanup stuff
  #192 - Cleanup stuff
  #192 - Cleanup stuff
  No issue. Fix issues with arrays in cas_to_comparable_text - added missing import.

# Conflicts:
#	cassis/util.py

- Run pyupgrade

* main:
  #225 - Add check for properly formatted README.rst (#226)
  No issue: Bum version after release
  Update release.md
  No isse: Fix README rst
  No issue: DKPro Cassis 0.6.0 release
  Create release.md
  No issue. Add release guide

* main:
  #231 - cas_to_comparable_text breaks saying that FSes do not have an ID
  #229 - Get transitive closure of types
  #227 - If a CAS contains no text the offset mapping initialization fails

* main:
  No issue: Bump version after release
  No issue: DKPro Cassis 0.6.1 release
  No issue. Fix PyDoc.

* main:
  #234 - cas_to_comparable_text fails with null arrays

* main:
  #238 - Error parsing FSList in CTAKES XMi
  #238 - Error parsing FSList in CTAKES XMi
  #238 - Error parsing FSList in CTAKES XMi
  Create CITATION.cff
  #236 - Long output when printing type (#237)

% Conflicts:
%	cassis/cas.py

- Added mention about non-final status in README file