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rdmorin edited this page Jun 20, 2024 · 11 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

BLK

Relevance tier by entity

Entity Tier Description
DLBCL 2-a aSHM target; Although recurrent, the relevance of mutations in DLBCL is tenuous

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 0.57
DLBCL Schmitz cohort 2.34
DLBCL Reddy cohort 0.70
DLBCL Chapuy cohort 0.85

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL Yes No 0.528 0
DLBCL Yes No 1.614 0
FL Yes No 3.528 0

aSHM regions

chr_name hg19_start hg19_end region regulatory_comment
chr8 11347723 11355318 TSS strong_enhancer

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

BLK Expression

References

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