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rdmorin edited this page Jun 21, 2024 · 16 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

MAP2K1

History

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timeline
    title Publication timing
      2015-03-01 : Shin : DLBCL
      2016-08-25 : Louissaint : FL
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Relevance tier by entity

Entity Tier Description
DLBCL 2 relevance in DLBCL not firmly established[@shinBRAFV600EMAP2K12015]
FL 1 high-confidence FL gene [@louissaintPediatrictypeNodalFollicular2016a]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 1.34
DLBCL Schmitz cohort 3.19
DLBCL Reddy cohort 2.20
DLBCL Chapuy cohort 2.14
FL GAMBL genomes 1.39

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No No 4.318 0
DLBCL No No 11.932 0
FL No No 5.696 0

MAP2K1 Hotspots

Chromosome Coordinate (hg19) ref>alt HGVSp
chr15 66727441 T>C F53L
chr15 66727454 A>C K57T

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

MAP2K1 Expression

References

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