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rdmorin edited this page Jun 21, 2024 · 9 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

SEL1L3

Relevance tier by entity

Entity Tier Description
DLBCL 2-a aSHM target; Although recurrent, the relevance of mutations in DLBCL is tenuous

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 5.16
DLBCL Schmitz cohort 4.04
DLBCL Reddy cohort 2.20
DLBCL Chapuy cohort NA

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL Yes No 0.665 3.278
DLBCL Yes No 1.724 0.000
FL Yes No 2.299 0.000

aSHM regions

chr_name hg19_start hg19_end region regulatory_comment
chr4 25861094 25868788 TSS NA

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

SEL1L3 Expression

References

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