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rdmorin edited this page Jun 21, 2024 · 14 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

TAP1

History

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timeline
    title Publication timing
      2018-04-12 : Schmitz : DLBCL
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Relevance tier by entity

Entity Tier Description
PMBL 1 high-confidence PMBL/cHL/GZL gene
DLBCL 2 relevance in DLBCL not firmly established[@schmitzGeneticsPathogenesisDiffuse2018a]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 0.57
DLBCL Schmitz cohort 3.62
DLBCL Reddy cohort NA
DLBCL Chapuy cohort 2.56

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No No 0.986 0.000
DLBCL No No 0.632 0.000
FL No No 3.142 39.164

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

TAP1 Expression

References

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