A simple simulator that shows the easy way how an antibiogram works

An educational simple game in Italian/English that simulates interaction between antbiotics and bacteria.

Shiny-based application for personalized dosing of flucloxacillin

This is a final deliverable for a project that attempts to examine the current meat industry through the lens of animal agriculture legislation and aims to identify the barriers to achieving effective animal welfare legislation.

Integrating bacterial molecular genetics with chemical biology for renewed antibacterial drug discovery: Jupyter notebook and data.

Project that estimates the use and overuse of antibiotics in Idaho based on Medicare Part D data.

SI-649 Individual Assignment - This website serves as a data analysis regarding three common antibiotic's effects upon various bacterial infections. This visualization is a Tableau Dashboard with the goal of displaying the varying effectiveness of Penicillin, Streptomycin, and Neomycin, on Gram-Positive/Negative bacteria.

Talk for ACPE2021 on Australian antibiotic use in the first 6 mo of COVID-19

Simple calculator made using the Tkinter module in Python. It calculates the centor criteria for tonsilitis that dictates whether a patient should be prescribed antibiotics.

Talk on Australian COVID-19-related disruptions in health services and data

PCD Pharma Companies in India | Sitnez Biocare

Tuberculosis and the microbiome

Data and Code

This repository contains scripts used to analyze data generated for the project described in the following manuscript (see ReadMe), including comparative analysis and visualization of nanoparticle tracking (quantification) and proteomics (composition) data of Group B Streptococcus membrane vesicles across various antibiotic treatment conditions.

Source for "Multi-Objective Evolutionary Optimisation of Antibiotic Treatments" (Ochoa, Christie, Brownlee, & Hoyle, 2020).

ABacAPP is a machine learning-based web application capable of predicting the antibacterial potency of any compound against β-lactamases (including β-lactamase, AmpC, Bla2, KPC-2, TEM-1, BRO-1, Class C, Class D, Type II, L1, NDM-1, SHV-1, SHV-5, OXA-1, and Metallo β-lactamase 1 and 2), DNA Gyrases (including DNA Gyrase, GyraseA, and GyraseB), Ba…

An antimicrobial resistance (AMR) dashboard.

Created during the 2018 Cornell Health Hackathon

A repository containing all the file projects that I have for the Bioinformatics 2 (COMP 4312a) course.

PyAMPA: The new version of the AMPA software