BioDynaMo is a high-performance and modular, agent-based simulation platform.

Multiple sequence alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.

A simulator for biological and physiological models

A C++ library of science for creating scalar, vectorial and field units, angles, coordinates and points, lab numbers, special units like pH, zone ids, astro ids, matrices of units, among other features! (under development)

Image processor for biological images

A gRNA database generation tool.

A bunch of C++ programs for working with bioinformatics files

Library for producing and processing on the Adaptive Particle Representation (APR).

Agent-Base Co-evolution Model started ~1995

3D Spiking neural network simulation exploring Spike Timing Dependent Plasticity (STDP)

Modeling of primers/probes hybridization on to a set of target viral sequences.

Android version. This calculator can calculate molar concentration, normal concentration and the ratio of DNA for ligation / Калькулятор для расчета молярной концентрации и нормальной концентрации растворов, а также для расчета соотношения фрагментов ДНК в реакции лигирования

Arduino based humidity and temperature datalogger.

O projeto "Células AR" utiliza realidade aumentada para criar uma experiência interativa e educativa no estudo das células, promovendo o aprendizado de forma envolvente e estimulante.

Protein structure comparison tools such as SSAP and SNAP

Firmware for the ReWire pulse oximeter

A visualizer for BD5-format files

Arduino library for interfacing with the MAX32664

Advanced Coarse-Grained Membrane Simulation

High-performance stochastic modeling of DNA loop extrusion interactions