SUTD 2020 10.007 Modelling the Systems World 1D Project
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Updated
Jun 6, 2020 - Python
SUTD 2020 10.007 Modelling the Systems World 1D Project
This repository contains a python code which calculates level populations and fluorescence efficiencies (g-factors) for atoms (or molecules) in the presence of a radiation field (e.g. the solar spectrum).
Fluorescence microscopy deconvolution scripts, using CUDA. DeltaVision and Zeiss Spinning-Disk formats supported.
🏮 Parsing and analysing platereader absorbance and fluorescence data.
Software and data associated with the article titled, "Binding, Brightness, or Noise? Extracting Temperature-dependent Properties of Dye Bound to DNA," Biophys. J. Accepted, (2023). doi:10.1016/j.bpj.2023.03.002
A python code for analyzing photobleaching in fluorescence microscopy from a time series TIF image stack
Python scripts and data analysis templates for the analysis of time-tag time-resolved flourescence (cross-) correlation data acquired in live cell experiments
Determine transition kinetics from single molecule FRET experiments
This is a repo for a Python based application to open SMS .h5 files, and perform the initial analysis and exporting.
A simple fluorescence microscopy simulation and visualization tool
Supplemental resources for the Nellie paper.
ifpd2: a Python3.7+ package to build iFISH probes
mdtraj_fps ia a command line tool to calculate FRET observables form MD-trajectories
PyFDAP is a Python-based analysis framework for Fluorescence Decay After Photoconversion (FDAP) experiments.
Quantitation of migration of fluorescent spots into regions of interest.
Zebrafish embryo fluorescence quantification
A suite of command line tools and a web app for plotting and analyzing fluorescence data.
Analyze fluorescence lifetime and anisotropy decays. (Mirror of github.com/fdsteffen/Lifefit)
Add a description, image, and links to the fluorescence topic page so that developers can more easily learn about it.
To associate your repository with the fluorescence topic, visit your repo's landing page and select "manage topics."