🔬 A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data

Automatic RNA-Seq Pipelines with Interactive Report

GEO RNA-seq Experiments Processing Pipeline

Materials for "Teaching Bioinformatics and R for dataviz course" June-August 2019 in Majorbio

Analysis of mutations at codon 625 of SF3B1 gene in uveal melanoma

Some of the analytical processes and tools we use to provide rigorous and actionable results to our clients.

De nove assembly and annotation of Fragilaria radians transcriptome

Pipeline for analyzing RNAseq data of human and mouse - beginner friendly with minimal user inputs

Quality Control, Mapping and Reads Count for RNA-Seq Analysis

Workflow for differential gene expression analysis for non-replicate samples using DEGseq

In this reposity I will give you all script I created. All this script are specialised for one way : annalyse RNA-seq data.

Single Cell RNA-seq analysis of Persister Cells to unearth key stress pathways and core, differential genes of those respective pathways

Lightweight RNA-seq pipeline to go from fastqs to differential expression using kallisto and sleuth

Interactive tools for comprehensive RNA-seq analysis, from data analysis to in-depth visualizations

RNA-seq Preprocessing for GSEA

Viper is a Snakemake workflow, aimed at performing the RNA-seq workflow of the paper 'Causes and consequences of a glutamine induced normoxic HIF1 activity for the tumor metabolism', Kappler et al. (2019) in a reproducible and automated manner

A repository for RNA-seq workflow

A simple code to analyze OTU table and RNA-seq normalization in R

Automated DE analysis by DESeq2