Python script to generate sequence feature tables (for data analysis, machine learning, etc)

Quicklog data browser made with Vue

Concepts in sequencing data analysis.

Application that can find peptide and nucleotide sequences from FASTA or text files.

quickvue

Sequence Analysis Pipeline for the IRIDA Platform for Viral Genomes

Sequence management tools relying on the Bioinformatics Databank Manager System, BeeDeeM (miror).

k-mer similarity metrics for two fastx files

Extension to RABV-GLUE capturing NCBI data.

Identifying viruses as an anomaly

C++ code for symbolic sequence processing, including genomic sequence processing (GSP)

Code for the analysis and figures for the paper: Manguy J, Shields DC. Implications of kappa-casein evolutionary diversity for the self-assembly and aggregation of casein micelles. Royal Society Open Science. 2019 Oct 16;6(10):190939. Available from: https://royalsocietypublishing.org/doi/10.1098/rsos.190939

Example workflow using LOCUS to identify viral sequences in bulk metagenomic data

Big Data tool for scalable short-read error correction

Testing variant calling with Google Cloud

R package for EDA and unsupervised learning of categorical sequence data

Detection of possible sumoylation sites that emerges through mutations in different cancers where mutations are mapped into sequence and analyzed

Analysis of FASTA ,Protein,DNA sequence.

A GLUE project for Deltaretroviruses

Sequence analysis of political trajectories over BRÉF data