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task-alignment

Here are 3 public repositories matching this topic...

Scindices / lh3--bwa

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

status-active task-alignment lang-c domain-bioinformatics interface-cli role-application status-published status-packaged-conda scope-focused method-statistics entity-nucleic-acid entity-sequence domain-genomics

Updated Jul 25, 2026
C

Scindices / samtools--samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

status-active task-alignment lang-c domain-bioinformatics interface-cli role-application task-file-io method-chemoinformatics status-published status-packaged-conda scope-focused method-statistics entity-nucleic-acid entity-sequence domain-genomics

Updated Jul 28, 2026
C

Scindices / lh3--minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

status-active task-alignment lang-c domain-bioinformatics interface-cli role-application status-published status-packaged-conda scope-focused method-statistics entity-nucleic-acid entity-sequence domain-genomics

Updated May 19, 2026
C

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