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Scipion is an image processing framework for obtaining 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents a unified interface for both biologists and developers. Scipion allows you to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on.

Getting Started

How to Contribute

  • Contact us to report bugs or suggest new features. We would like to hear from you.

  • Extend Scipion with new protocols or packages (require basic Python programming skills).

More Documentation

  • Extra documentation is divided into two main categories: Users and Developers.

Scipion on the Cloud

  • ScipionCloud images are available on commercial and academic clouds