Bioinf Tutorials
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Updated
Jul 2, 2024
Bioinf Tutorials
This is a program written in c# for neat organization of FASTA files into one file to make multiple sequencing alignments easier.
A set of processes/pipelines for bioinformatics
programs and scripts, mainly python, for analyses related to nucleic or protein sequences
Bystro genetic analysis (annotation, filtering, statistics)
Materials for course about processing HybSeq data on computing grids
Benchmarking various taxonomic classifiers for profiling soil metagenomic data, with scripts and tools tailored for fungal, bacterial, and archaeal genome identification.
Sequence Alignment tool
Data processing scripts for analysis of targeted metagenomics sequencing data. Intended for use with multiplexed Illumina short-read data generated after enrichment.
Set of scripts to process HybSeq target enrichment HTS data (on computing grids).
Assorted scripts in Perl, Bash, R and whatsoever directly from a bioinformatician's scripts/ folder
Various codes and scripts used during AI research. Orginally developed in the Binary_label_predictions_with_CNNs repository
Using data from PDBePISA with the convenience of Python and Jupyter.
histone modification hospot
Shell script to sort .gtf files
slurm and pbs scripts for genome, metagenome, transcriptome analysis.
Find motifs enriched around prominent crosslinks
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