A python library to develop genomic data simulators
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Updated
Aug 29, 2023 - Python
A python library to develop genomic data simulators
Collection of several small tools. These tools stay here temporarily and may move to other major repositories as they evolve.
A utility to merge a large number of VCF files incrementally
Lightweight standalone tool to reduce size of VCF files through filtering
to analyze multiple VCF files and generate a summary of variant metrics
It reads all values in certain rows and columns in Excel and converts phone number values to vcf. It can be converted to vcf by typing the prefix we want to add to the required section in the code. Adds phone numbers to our contact list in seconds. It has a simple and useful interface.
The main aim of this little project is to compare the European allele frequencies of the 1k genomes project with the gnomad frequencies.
A python parser for vcf bioinformatics file
Bioinformatics
create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks
Python Script for converting .csv contact files to .vcf.
A quick way to visualize VCF data in a html report
CNV analysis based on the depth of coverage of Illumina data
VCF file synthesiser with random variants
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