rename agents to agents_deprecated

[paul-nechifor]

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[greptile-apps]

Greptile Summary

Renamed the agents directory to agents_deprecated across the entire codebase. This is a comprehensive refactoring that affects 54 files including the agent module itself, all test files, documentation, and dependent modules.

Key Changes:

• Directory renamed from dimos/agents/ to dimos/agents_deprecated/
• All internal imports within the agents module updated to use agents_deprecated namespace
• All external references updated: 18 test files, README examples, robot modules, perception modules, and model integrations
• Mock paths in tests updated to reflect new import path (e.g., @mock.patch("dimos.agents_deprecated.agent.OpenAIAgent..."))

Thoroughness:
The refactoring appears complete and systematic. All import statements have been consistently updated, including relative imports within the module and absolute imports from external code. No references to the old dimos.agents path were found in the codebase.

Confidence Score: 5/5

• This PR is safe to merge with minimal risk - it's a straightforward namespace refactoring
• This is a mechanical rename operation that has been executed thoroughly and consistently. All 54 files have been updated correctly with no broken imports remaining. The change is low-risk because it only affects import paths without modifying any logic, and grep searches confirm no references to the old path remain.
• No files require special attention

Important Files Changed

Filename	Overview
README.md	Updated import path from dimos.agents to dimos.agents_deprecated in example code
dimos/agents_deprecated/agent.py	Updated internal imports to use agents_deprecated namespace consistently
dimos/agents_deprecated/modules/base.py	All internal imports correctly updated to agents_deprecated namespace
tests/test_agent_alibaba.py	Test imports updated from dimos.agents to dimos.agents_deprecated
tests/test_skills.py	Test imports and mock paths updated to use agents_deprecated namespace
dimos/models/qwen/video_query.py	Model imports updated to reference agents_deprecated for agent and tokenizer
dimos/perception/spatial_perception.py	Perception module imports updated to agents_deprecated namespace

Sequence Diagram

sequenceDiagram
    participant Dev as Developer
    participant Git as Git/Filesystem
    participant Code as Codebase
    
    Dev->>Git: Rename directory agents → agents_deprecated
    Git->>Code: Move all files to new path
    
    Dev->>Code: Update internal imports in agents_deprecated/
    Note over Code: agent.py: dimos.agents_deprecated.memory
    Note over Code: modules/base.py: dimos.agents_deprecated.*
    Note over Code: All other internal files
    
    Dev->>Code: Update external references
    Note over Code: README.md examples
    Note over Code: Test files (test_*.py)
    Note over Code: Models (qwen/video_query.py)
    Note over Code: Perception modules
    Note over Code: Robot modules
    
    Code-->>Dev: All 54 files updated consistently
    Dev->>Git: Commit changes

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