alignment
Here are 69 public repositories matching this topic...
A fully integrated K-mer Informed Toolkit for Bioinformatics
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May 18, 2024 - C++
Bioinformatics Data Structures & Algorithms [such as the Q-Gram Index, scoring alignments , rna-structure prediction, generating the BLAST-Ńeighborhood and more.]
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May 17, 2024 - C++
CoAler = Core Aligner (Multi-Alignment of Molecules)
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May 15, 2024 - C++
Aligns short reads using dynamic seed size with strobemers
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May 24, 2024 - C++
vcfdist: Accurately benchmarking phased variant calls
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May 8, 2024 - C++
✂️ Deep learning-based splice site predictor that improves spliced alignments
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May 5, 2024 - C++
Aligned-memory allocator for C++ STL containers
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May 2, 2024 - C++
An efficient OpenFST-based tool for calculating WER and aligning two transcript sequences.
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Apr 18, 2024 - C++
SortMeRNA: next-generation sequence filtering and alignment tool
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Apr 16, 2024 - C++
SeqAn's official repository.
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Apr 12, 2024 - C++
Real-time head pose estimation built with OpenCV and dlib
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Apr 5, 2024 - C++
Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
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Mar 31, 2024 - C++
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
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Mar 18, 2024 - C++
Table Maker for Modern C++
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Mar 5, 2024 - C++
A fast C++ tool to filter .bam files by CIGAR string
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Feb 11, 2024 - C++
Wally: Visualization of aligned sequencing reads and contigs
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Feb 5, 2024 - C++
SIMD C/C++ library for massive optimal sequence alignment (local/SW, infix, overlap, global)
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Jan 12, 2024 - C++
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