Project_Diag excap21 2014 03 18

140403_SN586.A.Project_Diag-excap21-2014-03-18 - Project_Diag-excap21-2014-03-18

| file | reps. | mail form Arvind | condor moved | condor started | condor finished | Variant calling Started | Variant calling Finished | Snp test | Delivery | | :-----------------------------------------------: | :---------------------------: | :-----: | :--------: | :------: | :------: | :------: | :------: | :------: | :------: |:------: | | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | | Sample_Diag-excap21-13000443401-EE-KIT-Av5 | yvan | 15.04.2014 | 15.04.2014 | 15.04.2014 | 22.04.2014 | 22.04.2014 @ 10h25 | 22.04.2014 @ 20h40 | pass | GOOD 23.04.2014 | | Sample_Diag-excap21-13001049001-EE-KIT-Av5 | yvan | 15.04.2014 | 15.04.2014 | 15.04.2014 | 22.04.2014 | 22.04.2014 @ 10h20 | 23.04.2014 @ 8h40 | pass | GOOD 23.04.2014 | | Sample_Diag-excap21-13001136701-EE-KIT-Av5 | yvan | 15.04.2014 | 15.04.2014 | 15.04.2014 | 22.04.2014 | 23.04.2014 @ 08h36| 23.04.2014 @ 16h50 | pass | GOOD 23.04.2014 | | Sample_Diag-excap21-13001142901-EE-KIT-Av5 | yvan | 15.04.2014 | 15.04.2014 | 15.04.2014 | 22.04.2014 | 23.04.2014 @ 07h246 | 23.04.2014 @ 16h50 | pass | GOOD 23.04.2014 | | Sample_Diag-excap21-14000062700-EE-KIT-Av5 | yvan | 15.04.2014 | 15.04.2014 | 15.04.2014 | 22.04.2014 | 22.04.2014 @ 10h15 | 22.04.2014 @ 21h50 | pass | GOOD 23.04.2014 | | Sample_Diag-excap21-14000070200-EE-KIT-Av5 | yvan | 15.04.2014 | 15.04.2014 | 15.04.2014 | 22.04.2014 | 22.04.2014 @ 21h49 | 23.04.2014 @ 07h25 | pass | GOOD 23.04.2014 |

Procedure

• Ying made the condor mapping
• I did the rest see the logs
• Something went wrong….
• I started the fingerprinting outside the pipeline, the postprocessing script check if the fingerpriting results are in 060, which they wern't, because of the running outside the pipeline, copy the reuslts into 060 and rerun postprocess