Skip to content

fingerprinting_procedure

yvancouver edited this page Jan 13, 2014 · 2 revisions
  1. MergeResults.py

     Checks is the path to vcf and definition files are correct 
     args.vcf args.def
    
  2. MergeResults then call SnpsHts

    2.0. What it does and in which order.

     First it imports the ReadDefinitionFile module, is this too early.
    

    2.1. SnpsHts functions , list ordered by first appearance ;-)

    2.1.1. GetVcfRecords

    2.1.2. GetSampleName

    2.1.3. GetSampleRunDate

    2.1.4. GetSampleRunDateAndSampleID

    2.1.5. GetSampleID_RunID_Index

    2.1.6. retrieveTaqManfile

Clone this wiki locally