Data Apps & Dashboards for Python. No JavaScript Required.
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Updated
Jun 19, 2024 - Python
Bioinformatics is an interdisciplinary field that intersects with biology, computer science, mathematics and statistics. It concerns itself with the development and use of methods and software tools for collecting and analyzing biological data.
Data Apps & Dashboards for Python. No JavaScript Required.
Official git repository for Biopython (originally converted from CVS)
Data intensive science for everyone.
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Single-cell analysis in Python. Scales to >1M cells.
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.
Plant phenotyping with image analysis
A full spaCy pipeline and models for scientific/biomedical documents.
COBRApy is a package for constraint-based modeling of metabolic networks.
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
Python library to facilitate genome assembly, annotation, and comparative genomics
Scripts to download genomes from the NCBI FTP servers
Pytorch Repo for DeepGCNs (ICCV'2019 Oral, TPAMI'2021), DeeperGCN (arXiv'2020) and GNN1000(ICML'2021): https://www.deepgcns.org
Annotated data.