Pythonic tool for orchestrating machine-learning/high performance/quantum-computing workflows in heterogeneous compute environments.

Snakemake-based workflow for detecting structural variants in genomic data

HemTools: a collection of NGS pipelines and bioinformatic analyses

https://MetPX.github.io/sarracenia

Executor plugin interfacing Covalent with Slurm

SSA2py: Source-Scanning Algorithm in Python

A testing framework that brings up clean environments and mini-clusters for developers in a hurry

Command-line utility for iteratively developing pipelines, deploying them at scale, and sharing data and derivatives

IDEA is a platform that facilitates distributed HPC and self-service Virtual Desktops on AWS

Repo2apptainer: Wrapper around repo2docker producing Jupyter enabled Apptainer/Singularity images.

Snakemake-based workflow for generating artificial genomes with structural variants

MD-ligand-receptor is a bioinformatics pipeline written in Python for analyzing non-covalent ligand-receptor interactions in 3D structures starting from a molecular dynamic trajectory.

divide blast query and run all chunks across HPC or localhost in parallelly

Sbox is a toolbox for Slurm that provides information about users activities and facilitate access to the cluster resources.

Command-line tool for benchmarking HPC hardware performance

IGB Cluster Easybuild Easyconfigs

A command line password cracking tool which works on a cluster(HPC).

Cluster and Cloud Computing Project. This application achieved language statistics within a larget amount of tweets in HPC cluster, with MPI protocol. COMP90024_Assignment_1.

Experiments with the loop scheduling options in OpenMP and creation of affinity loop scheduling in C.

Script to gather and display requested information from Univa Grid Engine / SGE