Sacred is a tool to help you configure, organize, log and reproduce experiments developed at IDSIA.
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Updated
Feb 17, 2024 - Python
Sacred is a tool to help you configure, organize, log and reproduce experiments developed at IDSIA.
High performance spatial analysis in a web browser, Node.js, and across programming languages and hardware architectures
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)
VisTrails is an open-source data analysis and visualization tool. It provides a comprehensive provenance infrastructure that maintains detailed history information about the steps followed and data derived in the course of an exploratory task: VisTrails maintains provenance of data products, of the computational processes that derive these produ…
A very simple, re-executable neuroimaging publication (code)
A curated list of reproducible research case studies, projects, tutorials, and media
ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science.
Source code for the CERN Analysis Preservation portal
SEER, reimplemented in python 🐍🔮
Everware is about re-useable science, it allows people to jump right in to your research code.
ukbREST: efficient and streamlined data access for reproducible research of large biobanks
Create powerful Hydra applications without the yaml files and boilerplate code.
Benchmark problems in 2D and 3D for the elastic wave equation.
Open Source Photometric classification https://supernnova.readthedocs.io
Currated reproducibility news displayed on reproducibility.org
Seamless is a framework to set up reproducible computations (and visualizations) that respond to changes in cells. Cells contain the input data as well as the source code of the computations, and all cells can be edited interactively.
Trimming and QC on NGS data
Reproducible research code for the experiments presented in our article "Kara1k: a karaoke dataset for cover song identification and singing voice analysis" published at IEEE ISM 2017
👜 Easily pick a place to store data for your Python code.
Code for Probabilistic Sequential Matrix Factorization
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