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get_cave_stack_info
jaybgager edited this page Sep 30, 2026
·
2 revisions
This function gets the official metadata information for a specific CAVE datastack directly from the publisher of the datastack.
Arguments:
-
datastack(string, mandatory)- the name of the CAVE datastack you want metadata for (e.g. "brain_and_nerve_cord")
Returns:
-
stack_info(dictionary)- a dictionary containing the official published metadata info for the requested datastack
The code below gets the metadata for the brain_and_nerve_cord datastack used in many of the tracertools examples.
INPUT:
import tracertools as tt
stack_info = tt.get_cave_stack_info(
datastack = "brain_and_nerve_cord"
)
print(stack_info)
OUTPUT:
{
'aligned_volume': {
'description': 'The BANC (said "the bank") is the Brain And Nerve Cord, a GridTape transmission electron microscopy dataset of a female adult Drosophila melanogaster\'s entire central nervous system. Visit https://banc.community for more information.',
'display_name': 'BANC',
'id': 9,
'image_source': 'precomputed://gs://seunglab_lee_fly_cns_001_alignment/aligned/v0',
'name': 'brain_and_nerve_cord'
},
'analysis_database': None,
'cell_identification_table': 'cell_info',
'description': None,
'local_server': 'https://cave.fanc-fly.com',
'proofreading_review_table': None,
'proofreading_status_table': 'backbone_proofread',
'segmentation_source': 'graphene://https://cave.fanc-fly.com/segmentation/table/wclee_fly_cns_001',
'skeleton_source': 'precomputed://https://cave.fanc-fly.com/skeletoncache/api/v1/brain_and_nerve_cord/precomputed/skeleton',
'soma_table': None,
'synapse_table': 'synapses_v2',
'viewer_resolution_x': 4.0,
'viewer_resolution_y': 4.0,
'viewer_resolution_z': 45.0,
'viewer_site': 'https://spelunker.cave-explorer.org/'
}
Note
This output was generated on 2026/09/30 and may have been updated by the time you run this code in the future.